Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4145

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4144: 12512 - K01669 phrB deoxyribodipyrimidine photo-lyase, at 1457920 to 1460424 12512 mRNA_4145: 12513 - K00641 metX homoserine O-acetyltransferase, at 1460929 to 1462648 12513 mRNA_4146: 12514 - Hypothetical Protein, at 1463545 to 1465730 12514

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,460,073 + 12512 mRNA_4144 0.86 0.0
1,460,368 + -0.5
1,460,371 + -2.8
1,460,494 + -0.7
1,460,509 - -1.0
1,460,521 + -0.7
1,460,643 + 0.5
1,460,645 - 0.0
1,460,650 + 0.7
1,460,666 + -1.5
1,460,681 + -2.5
1,460,681 + -3.0
1,460,681 + -3.3
1,460,819 + -0.9
1,460,820 + -1.0
1,460,985 + -2.8
1,461,793 + 12513 mRNA_4145 0.50 -3.2
1,461,981 - 12513 mRNA_4145 0.61 0.4
1,461,986 + 12513 mRNA_4145 0.61 0.9
1,462,563 + -1.5
1,462,568 - -0.1
1,462,693 - -0.6
1,462,696 - -0.6
1,462,722 - -1.3
1,462,737 - -0.0
1,462,820 - -1.1
1,462,849 + -2.5
1,462,894 + -2.2
1,462,984 - -3.5
1,463,152 - -3.1
1,463,592 + -1.2