Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4077

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4076: 12444 - K12486 SMAP stromal membrane-associated protein, at 1298752 to 1301700 12444 mRNA_4077: 12445 - K07101 K07101 uncharacterized protein, at 1302423 to 1303629 12445 mRNA_4078: 12446 - K15113 SLC25A28_37, MFRN solute carrier family 25 (mitochondrial iron transporter), member 28/37, at 1304560 to 1305720 12446

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,301,454 - -3.7
1,301,461 + -1.0
1,301,601 - -2.6
1,301,757 - -2.3
1,301,765 + -0.6
1,301,770 - -1.9
1,301,772 - -2.7
1,301,773 + -1.7
1,301,903 + -1.0
1,301,903 + -5.1
1,301,909 + -2.1
1,302,042 + -3.3
1,302,209 - -0.4
1,302,614 - 12445 mRNA_4077 0.16 -2.7
1,302,620 - 12445 mRNA_4077 0.16 -2.1
1,302,621 - 12445 mRNA_4077 0.16 0.2
1,302,633 + 12445 mRNA_4077 0.17 0.3
1,302,929 - 12445 mRNA_4077 0.42 -2.6
1,303,040 - 12445 mRNA_4077 0.51 -1.0
1,303,071 + 12445 mRNA_4077 0.54 -2.4
1,303,178 - 12445 mRNA_4077 0.63 -1.5
1,303,377 + 12445 mRNA_4077 0.79 0.5
1,303,465 - 12445 mRNA_4077 0.86 -0.3
1,303,660 + -0.6
1,303,795 - -4.2
1,303,946 + -2.0
1,304,254 - -1.6
1,304,256 + -2.6
1,304,398 + -0.0
1,304,402 + 0.4
1,304,402 + 1.1
1,304,406 + -1.3