Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4067

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4066: 12434 - K03426 E3.6.1.22, NUDT12, nudC NAD+ diphosphatase, at 1273272 to 1275258 12434 mRNA_4067: 12435 - KOG0324 Uncharacterized conserved protein, at 1275390 to 1276654 12435 mRNA_4068: 12436 - K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter, at 1277194 to 1279271 12436

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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1,274,770 + 12434 mRNA_4066 0.75 -1.9
1,274,920 - 12434 mRNA_4066 0.83 -1.9
1,275,048 - 12434 mRNA_4066 0.89 -2.1
1,275,187 + 1.5
1,275,203 - 1.9
1,275,212 - -2.1
1,275,213 + 0.5
1,275,361 + -1.7
1,275,364 + -1.1
1,275,372 + -1.4
1,275,889 - 12435 mRNA_4067 0.39 -1.4
1,275,927 - 12435 mRNA_4067 0.42 -1.1
1,275,928 - 12435 mRNA_4067 0.43 -2.4
1,275,959 + 12435 mRNA_4067 0.45 1.1
1,276,107 + 12435 mRNA_4067 0.57 -1.0
1,276,890 - -0.1
1,277,419 - 12436 mRNA_4068 0.11 -1.3