Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3930

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3929: 12297 - BLAST TKL/TKL-ccin protein kinase [Mycena chlorophos], at 925744 to 929341 12297 mRNA_3930: 12298 - Hypothetical Protein, at 929708 to 931043 12298 mRNA_3931: 12299 - BLAST protein [Lichtheimia corymbifera JMRC-FSU-9682], at 931506 to 935642 12299

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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928,966 + 12297 mRNA_3929 0.90 -0.2
929,190 - -1.3
929,339 + -2.0
929,509 + -4.4
929,762 - 0.8
929,838 + -2.4
929,933 + 12298 mRNA_3930 0.17 -3.2
930,234 + 12298 mRNA_3930 0.39 -0.7
930,240 + 12298 mRNA_3930 0.40 0.1
930,240 + 12298 mRNA_3930 0.40 -0.6
930,514 + 12298 mRNA_3930 0.60 -1.4
930,527 + 12298 mRNA_3930 0.61 -2.3
930,982 + -0.5
931,086 + -0.8
931,088 + -1.1
931,232 + 0.5
931,234 + -2.1
931,241 + 0.1
931,270 + -1.7
931,379 - -4.3
931,403 - -1.7
931,407 + -2.8
931,412 + -1.4
931,427 - 0.1
931,429 + -0.5
931,433 - 0.5
931,450 + -0.4
931,699 + -1.3
931,866 + -0.8
931,890 + 0.1
931,896 - -1.1
932,001 + 12299 mRNA_3931 0.12 0.7