Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3882

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3881: 12249 - Hypothetical Protein, at 814368 to 814862 12249 mRNA_3882: 12250 - Hypothetical Protein, at 815200 to 816864 12250 mRNA_3883: 12251 - K01784 galE, GALE UDP-glucose 4-epimerase, at 817567 to 820111 12251

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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814,304 + 1.5
814,305 - -2.8
814,316 + -0.9
814,317 - -0.3
814,320 - -1.9
814,333 + -0.3
814,334 + -0.2
814,356 + 0.3
814,386 - -2.8
814,398 - -2.2
814,402 - 0.4
814,405 + -0.8
814,421 - 12249 mRNA_3881 0.11 -1.1
814,422 + 12249 mRNA_3881 0.11 -0.8
814,472 - 12249 mRNA_3881 0.21 -2.8
814,477 + 12249 mRNA_3881 0.22 -3.2
814,478 - 12249 mRNA_3881 0.22 -1.9
814,492 - 12249 mRNA_3881 0.25 -1.5
814,492 + 12249 mRNA_3881 0.25 -2.8
814,499 + 12249 mRNA_3881 0.26 -3.3
814,506 - 12249 mRNA_3881 0.28 -0.7
814,529 - 12249 mRNA_3881 0.33 -3.2
814,539 + 12249 mRNA_3881 0.35 0.4
814,582 - 12249 mRNA_3881 0.43 -2.1
814,651 - 12249 mRNA_3881 0.57 -1.6
814,799 - 12249 mRNA_3881 0.87 -1.2
814,806 - 12249 mRNA_3881 0.88 -1.7
814,806 - 12249 mRNA_3881 0.88 -1.3
814,942 + -0.7
814,943 - -2.5
814,951 - -2.9
814,973 + -1.9
815,124 - 0.3
815,731 + 12250 mRNA_3882 0.32 -3.1
815,856 + 12250 mRNA_3882 0.39 -0.3
816,006 + 12250 mRNA_3882 0.48 -0.0
816,016 - 12250 mRNA_3882 0.49 -1.8
816,560 - 12250 mRNA_3882 0.82 -1.0
816,591 - 12250 mRNA_3882 0.84 -1.7
816,601 + 12250 mRNA_3882 0.84 -3.9
816,851 + -2.8
816,857 + -3.6
816,865 + -3.2
816,904 - -0.1
816,915 - 0.2
817,016 + -1.9
817,037 - 0.1
817,040 + -0.4
817,041 - 0.0
817,054 - -1.9
817,060 - -2.1
817,063 + 0.1
817,068 + -0.5
817,068 + -0.4
817,104 + -2.4
817,111 + -3.5
817,112 - -0.0
817,115 + -0.4
817,133 + -0.4
817,141 + -1.2
817,161 - -0.4
817,168 + -2.6
817,169 - -1.6
817,179 + -2.3
817,183 - -3.7
817,195 - -1.6
817,196 + -0.6
817,201 + -0.9
817,274 - -1.0
817,344 + 2.5
817,351 + -1.6
817,372 + -1.3
817,383 + 0.0
817,489 - -0.5
817,501 - -0.8
817,503 + -2.5
817,512 + -1.0
817,518 - -3.9
817,623 - -0.0
817,646 + -1.4
817,651 + -0.6
817,660 + -1.2
817,694 + -1.6
817,831 - 12251 mRNA_3883 0.10 -0.7