Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3854

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3853: 12221 - K08193 SLC17A MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other, at 746204 to 748742 12221 mRNA_3854: 12222 - Hypothetical Protein, at 749490 to 750342 12222 mRNA_3855: 12223 - SUPERFAMILY--SSF52047, at 750615 to 752769 12223

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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748,648 - -1.1
748,650 + 0.3
748,657 + -2.8
748,782 - -1.9
748,800 + -1.3
748,810 - 0.3
748,814 - 1.2
748,831 + -0.9
748,912 + -1.0
748,914 + -3.0
748,915 - -1.8
748,931 + -2.4
748,935 + -0.2
748,936 - -0.2
748,937 + -2.6
748,939 - 0.4
748,948 + -1.2
748,953 - -1.6
748,976 - 0.7
748,982 + -1.7
748,991 + -2.5
748,998 - -0.8
749,044 + 0.7
749,048 - -0.8
749,057 - -0.8
749,058 - -3.3
749,063 - -1.9
749,068 + -2.6
749,071 + -0.1
749,072 + -1.5
749,089 - -0.7
749,096 + -1.0
749,098 - 0.2
749,225 + -0.8
749,227 - -2.6
749,243 - -0.3
749,251 - 0.2
749,258 - -2.3
749,259 + -1.7
749,263 + -2.8
749,266 + -2.3
749,268 - -0.4
749,283 + -1.4
749,364 - -2.3
749,373 - -3.2
749,374 + -1.6
749,379 + -3.1
749,388 - 0.9
749,392 + -0.4
749,393 - -0.7
749,395 + -1.5
749,402 + -0.7
749,402 + -2.4
749,409 + 0.2
749,416 - -0.5
749,422 + -0.9
749,423 + -1.1
749,425 - 0.1
749,425 + -1.3
749,538 + -3.2
749,583 - 12222 mRNA_3854 0.11 -1.6
749,588 - 12222 mRNA_3854 0.11 -1.2
749,661 - 12222 mRNA_3854 0.20 1.9
749,852 - 12222 mRNA_3854 0.42 -3.1
749,999 - 12222 mRNA_3854 0.60 -0.5
750,004 + 12222 mRNA_3854 0.60 -0.8
750,021 - 12222 mRNA_3854 0.62 -2.6
750,046 + 12222 mRNA_3854 0.65 -0.6
750,391 + -1.4
751,165 + 12223 mRNA_3855 0.26 -3.2
751,196 + 12223 mRNA_3855 0.27 0.5