Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3839

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3838: 12206 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 706826 to 713191 12206 mRNA_3839: 12207 - BLAST E3 ubiquitin-protein ligase RNF213 [Mus musculus] [Rh..., at 713356 to 714077 12207 mRNA_3840: 12208 - K18849 BMT2 25S rRNA (adenine2142-N1)-methyltransferase, at 714373 to 715825 12208

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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712,423 - 12206 mRNA_3838 0.88 -2.1
712,660 + -1.5
712,686 - -2.6
712,990 + 0.1
713,000 - 0.8
713,141 - -1.3
713,311 + 1.4
713,424 - 0.2
713,568 + 12207 mRNA_3839 0.29 -3.6
713,577 - 12207 mRNA_3839 0.31 0.0
714,021 + -1.9
714,033 + -2.8
714,091 - -0.2
714,301 - -3.1
714,740 + 12208 mRNA_3840 0.25 -1.0
715,003 + 12208 mRNA_3840 0.43 -0.9