Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3837

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3837: 12205 - K01044 CES1 carboxylesterase 1, at 704391 to 706480 12205 mRNA_3838: 12206 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 706826 to 713191 12206

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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703,452 + -1.5
703,766 + -1.4
703,875 - -3.1
703,893 + -3.4
703,896 + -1.9
703,906 + 1.5
703,909 - -3.6
704,188 + -1.8
704,242 - -3.0
704,347 + -1.9
704,385 - 0.0
704,489 + 0.0
704,616 - 12205 mRNA_3837 0.11 -1.4
704,653 - 12205 mRNA_3837 0.13 -1.6
704,802 + 12205 mRNA_3837 0.20 -1.8
705,061 + 12205 mRNA_3837 0.32 -0.2
705,072 - 12205 mRNA_3837 0.33 -1.7
705,152 + 12205 mRNA_3837 0.36 -1.3
705,196 + 12205 mRNA_3837 0.39 -2.7
705,896 - 12205 mRNA_3837 0.72 -2.3
706,398 + -1.0
706,494 - -0.0
707,153 - -2.5