Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3835

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3834: 12202 - Hypothetical Protein, at 695407 to 697402 12202 mRNA_3835: 12203 - K09260 MEF2A MADS-box transcription enhancer factor 2A, at 697638 to 699790 12203

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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696,776 + 12202 mRNA_3834 0.69 1.1
696,817 - 12202 mRNA_3834 0.71 -0.9
697,664 - -3.2
698,500 + 12203 mRNA_3835 0.40 0.5
698,672 + 12203 mRNA_3835 0.48 -1.4
699,110 - 12203 mRNA_3835 0.68 0.9
699,250 - 12203 mRNA_3835 0.75 -1.3
699,529 - 12203 mRNA_3835 0.88 -1.0
699,532 - 12203 mRNA_3835 0.88 -1.7
699,810 + 0.5
699,969 - -0.7
699,991 + -2.5
700,118 - -2.8
700,143 - -2.1
700,283 - -2.0
700,426 - -1.1
700,428 - -2.0
700,472 - -0.2
700,524 - -2.3
700,530 - -2.5
700,538 + -3.9
700,553 - -1.6
700,553 + -1.2
700,607 + 1.3
700,621 + 0.0
700,630 - -3.0
700,681 - -0.7
700,779 + -1.2