Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3834

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3833: 12201 - K15196 BRF1, GTF3B transcription factor IIIB 90 kDa subunit, at 692168 to 694484 12201 mRNA_3834: 12202 - Hypothetical Protein, at 695407 to 697402 12202 mRNA_3835: 12203 - K09260 MEF2A MADS-box transcription enhancer factor 2A, at 697638 to 699790 12203

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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694,855 - 0.2
694,876 + -4.3
694,992 - -0.3
695,007 - -3.3
695,036 + -0.3
695,141 - -2.1
695,154 + -1.7
695,213 + -2.7
696,061 + 12202 mRNA_3834 0.33 1.1
696,282 - 12202 mRNA_3834 0.44 -1.7
696,776 + 12202 mRNA_3834 0.69 1.1
696,817 - 12202 mRNA_3834 0.71 -0.9
697,664 - -3.2