Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3783

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3782: 12150 - K04354 PPP2R2 serine/threonine-protein phosphatase 2A regulatory subunit B, at 568603 to 571218 12150 mRNA_3783: 12151 - KOG1502 Flavonol reductase/cinnamoyl-CoA reductase, at 572145 to 573439 12151 mRNA_3784: 12152 - KOG1188 WD40 repeat protein, at 573950 to 575324 12152

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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571,481 + -0.9
572,041 - -2.4
572,053 - -2.1
572,060 + -2.6
572,258 + 0.8
572,353 + 12151 mRNA_3783 0.16 -1.6
572,651 - 12151 mRNA_3783 0.39 0.9
572,673 - 12151 mRNA_3783 0.41 0.3
572,674 + 12151 mRNA_3783 0.41 -2.6
573,082 - 12151 mRNA_3783 0.72 0.3
573,082 - 12151 mRNA_3783 0.72 0.0
573,516 + -1.7
573,520 - -3.5
573,539 + -1.7
573,542 - -0.4
573,675 - 0.7
574,322 + 12152 mRNA_3784 0.27 -0.4