Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3773

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3772: 12140 - K17662 CBP3, UQCC cytochrome b pre-mRNA-processing protein 3, at 546453 to 547644 12140 mRNA_3773: 12141 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 547802 to 549606 12141

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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546,914 + 12140 mRNA_3772 0.39 -0.1
547,417 - 12140 mRNA_3772 0.81 -1.5
547,426 + 12140 mRNA_3772 0.82 -1.4
547,850 - -0.5
548,035 - 12141 mRNA_3773 0.13 -3.1
548,390 - 12141 mRNA_3773 0.33 -1.3
548,680 - 12141 mRNA_3773 0.49 0.0
549,048 - 12141 mRNA_3773 0.69 -0.1
549,063 + 12141 mRNA_3773 0.70 -1.1
549,749 + 1.0
549,783 - -3.3
549,831 - 0.5
549,881 - -1.6
549,890 + -1.7
549,908 - -3.7
549,933 - 0.0
549,933 + -1.5
549,938 + -1.2
549,953 - -1.4
549,955 - -1.4
550,056 - 0.2
550,078 - 0.2
550,352 + 0.0
550,362 + -1.0
550,488 + -3.6
550,490 - -1.3