Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3763

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3762: 12130 - Hypothetical Protein, at 525460 to 525822 12130 mRNA_3763: 12131 - Hypothetical Protein, at 526166 to 531244 12131 mRNA_3764: 12132 - K11808 ADE2 phosphoribosylaminoimidazole carboxylase, at 531400 to 533650 12132

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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525,171 - -3.6
525,252 - -1.2
525,269 + -2.3
525,377 + -4.1
525,566 + 12130 mRNA_3762 0.29 1.5
525,844 + -1.3
525,949 - -0.8
526,106 - -2.4
526,131 + -0.8
526,253 - 1.1
526,280 - -1.5
526,284 + -0.3
526,285 + -1.6
526,389 - 0.5
526,394 - -0.7
526,947 - 12131 mRNA_3763 0.15 -0.3
527,161 - 12131 mRNA_3763 0.20 -1.1
527,161 + 12131 mRNA_3763 0.20 -3.1
527,982 + 12131 mRNA_3763 0.36 -1.1
528,022 + 12131 mRNA_3763 0.37 0.0
528,091 - 12131 mRNA_3763 0.38 -2.4
528,109 - 12131 mRNA_3763 0.38 -3.0
528,117 + 12131 mRNA_3763 0.38 -2.9
528,133 + 12131 mRNA_3763 0.39 -0.9
528,134 - 12131 mRNA_3763 0.39 -1.5
528,304 + 12131 mRNA_3763 0.42 -2.0
528,398 - 12131 mRNA_3763 0.44 -1.1
528,413 + 12131 mRNA_3763 0.44 -1.6
528,606 - 12131 mRNA_3763 0.48 -1.2
529,000 - 12131 mRNA_3763 0.56 -0.1
530,160 - 12131 mRNA_3763 0.79 -2.0
530,222 - 12131 mRNA_3763 0.80 -1.8
530,452 - 12131 mRNA_3763 0.84 -0.9
530,559 - 12131 mRNA_3763 0.86 -0.8
530,902 + 1.1