Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3761

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3760: 12128 - K10746 EXO1 exonuclease 1, at 521061 to 522364 12128 mRNA_3761: 12129 - K20520 DBNL, ABP1 drebrin-like protein, at 522660 to 525046 12129 mRNA_3762: 12130 - Hypothetical Protein, at 525460 to 525822 12130

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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521,800 + 12128 mRNA_3760 0.57 -1.6
521,862 - 12128 mRNA_3760 0.61 -3.1
522,152 + 12128 mRNA_3760 0.84 -0.0
522,257 - -3.1
522,575 + -2.2
522,594 + 0.8
522,732 - -0.8
522,868 - 1.0
522,884 + -0.7
523,214 - 12129 mRNA_3761 0.23 -3.2
523,594 - 12129 mRNA_3761 0.39 -3.6
524,205 - 12129 mRNA_3761 0.65 -2.6
524,464 - 12129 mRNA_3761 0.76 -0.2
524,782 + 12129 mRNA_3761 0.89 1.4
524,913 - 0.5
524,933 + -1.9
524,934 + -0.1
524,945 + -2.2
525,083 - -0.4
525,088 + 0.4
525,171 - -3.6
525,252 - -1.2
525,269 + -2.3
525,377 + -4.1
525,566 + 12130 mRNA_3762 0.29 1.5
525,844 + -1.3
525,949 - -0.8