Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3733

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3732: 12100 - K02541 MCM3 DNA replication licensing factor MCM3, at 453754 to 456999 12100 mRNA_3733: 12101 - BLAST Hybrid signal transduction histidine kinase B [Leucoa..., at 457405 to 460471 12101 mRNA_3734: 12102 - Interpro Protein HRI1, at 460954 to 461748 12102

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
457,115 + -2.6
457,142 - -3.9
457,155 + -0.4
457,158 - -0.4
457,170 + -0.5
457,174 - -0.9
457,175 + -1.9
457,175 - -4.0
457,178 - -1.2
457,307 - -1.7
457,330 - -1.5
457,782 + 12101 mRNA_3733 0.12 0.2
458,511 - 12101 mRNA_3733 0.36 0.5
458,545 - 12101 mRNA_3733 0.37 -1.7
459,539 - 12101 mRNA_3733 0.70 -1.4
459,540 + 12101 mRNA_3733 0.70 1.0
459,839 - 12101 mRNA_3733 0.79 -1.1
460,006 - 12101 mRNA_3733 0.85 0.6
460,010 - 12101 mRNA_3733 0.85 2.2
460,047 - 12101 mRNA_3733 0.86 -1.6
460,141 + 12101 mRNA_3733 0.89 -2.7
460,142 - 12101 mRNA_3733 0.89 -2.3
460,150 + 12101 mRNA_3733 0.90 -0.5
460,152 - 12101 mRNA_3733 0.90 -2.3
460,158 - 12101 mRNA_3733 0.90 -0.8
460,163 - 12101 mRNA_3733 0.90 0.9
460,170 + -1.4
460,171 - -1.7
460,175 - -2.1
460,190 + -1.2
460,198 + -1.6
460,320 - -2.1
460,321 - 0.9
460,326 - -0.8
460,331 + -2.1
460,342 + -1.1
460,348 - 0.1
460,352 + 0.0
460,373 - 0.0
460,474 - 0.9
460,514 - 0.6
460,518 - 0.2
460,519 + -0.2
460,525 + -0.5
460,532 + -0.3
460,542 - -2.3
460,544 + -3.7
460,556 + -0.9
460,562 - 0.3
460,564 - -1.4
460,569 + -1.2
460,599 + -0.6
460,606 - -1.4
460,611 - -2.0
460,612 - -1.9
460,618 + -1.8
460,631 - -2.0
460,631 + 1.4
460,636 + -2.3
460,636 - -3.5
460,643 - -1.2
460,648 - -2.7
460,652 - -2.3
460,661 - 1.4
460,675 + -2.4
460,681 + -2.7
460,824 + -1.0
460,901 - -0.9
461,224 - 12102 mRNA_3734 0.34 -1.5
461,243 - 12102 mRNA_3734 0.36 -1.6