Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3706

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3704: 12072 - Hypothetical Protein, at 399058 to 399573 12072 mRNA_3705: 12073 - Hypothetical Protein, at 399729 to 400196 12073 mRNA_3706: 12074 - KOG1550 Extracellular protein SEL-1 and related proteins, at 400186 to 402852 12074 mRNA_3707: 12075 - KOG2846 Predicted membrane protein, at 403479 to 405078 12075

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
399,549 - -0.9
399,572 + 1.2
399,691 - -1.3
399,702 + -0.2
399,715 + -0.3
399,839 - 12073 mRNA_3705 0.24 -0.1
399,872 - 12073 mRNA_3705 0.31 -0.2
399,874 + 12073 mRNA_3705 0.31 -0.3
399,903 - 12073 mRNA_3705 0.37 -1.7
399,990 - 12073 mRNA_3705 0.56 0.6
400,000 - 12073 mRNA_3705 0.58 -2.4
400,292 - -1.9
400,296 + -2.1
400,525 + 12074 mRNA_3706 0.13 -1.2
400,769 + 12074 mRNA_3706 0.22 -1.4
400,992 - 12074 mRNA_3706 0.30 -1.5
401,166 + 12074 mRNA_3706 0.37 -0.6
401,413 - 12074 mRNA_3706 0.46 -0.8
401,622 + 12074 mRNA_3706 0.54 -2.9
401,626 - 12074 mRNA_3706 0.54 -2.2
401,713 - 12074 mRNA_3706 0.57 -0.8
401,912 - 12074 mRNA_3706 0.65 -1.6
401,922 + 12074 mRNA_3706 0.65 -2.9
402,056 + 12074 mRNA_3706 0.70 -2.5
402,158 - 12074 mRNA_3706 0.74 0.1
402,180 - 12074 mRNA_3706 0.75 -1.5
402,196 + 12074 mRNA_3706 0.75 -0.4
403,035 - -1.9
403,077 + -1.4
403,079 + -1.9
403,163 + 1.3
403,204 + -0.6
403,215 - -1.5
403,226 + -0.6
403,322 + -0.5
403,344 - -1.9
403,350 - -1.2
403,357 - -0.6
403,358 - -3.2
403,359 - -2.9
403,383 + -0.6
403,384 + -0.6
403,529 - -0.8