Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3700

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3699: 12067 - KOG0870 DNA polymerase epsilon, subunit D, at 386627 to 387665 12067 mRNA_3700: 12068 - K03020 RPC19, POLR1D DNA-directed RNA polymerases I and III subunit RPAC2, at 387944 to 388740 12068 mRNA_3701: 12069 - ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257, at 389089 to 390202 12069

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
387,133 - 12067 mRNA_3699 0.49 -0.9
387,134 - 12067 mRNA_3699 0.49 -0.5
387,261 - 12067 mRNA_3699 0.61 -0.1
387,713 + -0.7
387,745 - -1.4
387,876 + 0.2
388,030 + 12068 mRNA_3700 0.11 -1.6
388,030 - 12068 mRNA_3700 0.11 -1.2
388,774 + 0.4
388,777 + -0.6
388,784 - -1.2
388,897 + -1.8
388,899 + -0.5
388,908 + -1.9
388,914 + -1.0
388,927 - -0.5
388,934 - -0.8
389,054 - -1.3
389,054 - -0.6
389,093 - -0.6
389,205 + 12069 mRNA_3701 0.10 -0.1
389,223 + 12069 mRNA_3701 0.12 -2.2
389,621 - 12069 mRNA_3701 0.48 -1.4