Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3695

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3694: 12062 - K18334 fucD L-fuconate dehydratase, at 376601 to 378918 12062 mRNA_3695: 12063 - KOG1730 Thioredoxin-like protein, at 379073 to 379916 12063 mRNA_3696: 12064 - SUPERFAMILY--SSF53335, at 380275 to 383085 12064

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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378,518 + 12062 mRNA_3694 0.83 0.0
378,660 - 12062 mRNA_3694 0.89 -1.7
378,667 + 12062 mRNA_3694 0.89 -3.0
379,516 + 12063 mRNA_3695 0.52 -0.9
379,681 + 12063 mRNA_3695 0.72 -3.1
379,710 + 12063 mRNA_3695 0.75 -0.7
379,723 + 12063 mRNA_3695 0.77 -2.0
379,823 + 12063 mRNA_3695 0.89 -2.7
379,978 + -4.9
379,981 - -0.2
380,000 + -1.9
380,002 + -2.9
380,009 + 0.2
380,021 + -0.8
380,139 - -1.2
380,165 - -1.3
380,286 + -0.0
380,401 - 0.4
380,411 + 0.2
380,537 - -0.6
380,553 + -2.5
380,705 - 12064 mRNA_3696 0.15 -1.2