Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3693

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3692: 12060 - K04371 MAPK1_3 mitogen-activated protein kinase 1/3, at 370780 to 372675 12060 mRNA_3693: 12061 - K01714 dapA 4-hydroxy-tetrahydrodipicolinate synthase, at 373119 to 374635 12061

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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372,187 + 12060 mRNA_3692 0.74 0.2
372,318 - 12060 mRNA_3692 0.81 -1.4
372,775 + -0.6
373,050 + -0.9
373,239 - -1.0
373,239 + -0.9
373,803 - 12061 mRNA_3693 0.45 -3.9
373,823 + 12061 mRNA_3693 0.46 -0.0
374,280 + 12061 mRNA_3693 0.77 -1.3
374,282 + 12061 mRNA_3693 0.77 0.7
374,518 - -1.0
374,520 + -0.5
374,525 - -0.1
374,546 + -0.7
374,549 - -2.3
374,678 - -0.7
374,681 - 0.0
374,688 - -1.1
374,693 + -1.1
374,697 + -1.5
374,698 + -2.4
374,717 + -0.3
374,721 + -0.4
374,724 + -0.4
374,724 - 0.5
374,753 - -1.3
374,773 - -1.0
374,807 - 0.0
374,809 - 0.6
374,810 - 0.1
374,812 - 0.3
374,812 + 1.5
374,813 + -0.2
374,821 - -0.1
374,825 - -1.7
374,829 - -2.9
374,840 + -1.4
374,840 + -3.0