Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3666

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3666: 12034 - K16055 TPS trehalose 6-phosphate synthase/phosphatase, at 297311 to 299921 12034 mRNA_3667: 12035 - KOG3455 Predicted membrane protein, at 300155 to 301036 12035

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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296,316 + -1.8
296,319 + -2.6
296,431 - -2.5
296,610 - -2.7
296,612 - -2.3
296,626 + -2.6
296,768 - -4.4
296,781 + -3.0
296,781 + -2.1
296,912 + -1.4
296,912 + -2.5
296,941 + -2.6
297,186 - -2.4
297,354 + 1.4
297,917 - 12034 mRNA_3666 0.23 -1.2
298,091 - 12034 mRNA_3666 0.30 -1.5
298,368 - 12034 mRNA_3666 0.40 -2.0
299,114 + 12034 mRNA_3666 0.69 -1.1
299,817 + -0.7
300,079 + -2.0