Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3632

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3631: 11999 - Hypothetical Protein, at 206956 to 207306 11999 mRNA_3632: 12000 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Serine/Threonine protein kinases active-site signature.-PS00108,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 207689 to 209563 12000

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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206,856 - -1.3
207,039 - 11999 mRNA_3631 0.24 -0.1
207,315 + -0.3
207,605 + 0.1
207,606 - 0.0
208,208 - 12000 mRNA_3632 0.28 -1.5
208,229 - 12000 mRNA_3632 0.29 1.1
208,607 - 12000 mRNA_3632 0.49 -0.6
208,923 + 12000 mRNA_3632 0.66 -0.3
209,061 - 12000 mRNA_3632 0.73 0.3
209,514 + -0.1
209,634 + -2.3
209,634 - -0.2
209,650 - -2.4
209,753 - -0.5
209,777 + 0.1
209,935 - -2.2
209,952 - -1.6
209,953 + -1.4
209,973 + -0.3
210,092 - -1.6
210,261 + 0.1