Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3551

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3550: 11918 - Hypothetical Protein, at 26790 to 27797 11918 mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28216 to 30545 11919 mRNA_3552: 11920 - K10884 XRCC6, KU70, G22P1 ATP-dependent DNA helicase 2 subunit 1, at 30770 to 33816 11920

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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27,332 + 11918 mRNA_3550 0.54 -1.2
27,494 + 11918 mRNA_3550 0.70 0.1
27,737 + 0.1
28,981 - 11919 mRNA_3551 0.33 0.0
29,331 - 11919 mRNA_3551 0.48 -1.7
29,644 + 11919 mRNA_3551 0.61 -2.0
29,658 - 11919 mRNA_3551 0.62 -2.7
29,739 - 11919 mRNA_3551 0.65 0.6
29,766 - 11919 mRNA_3551 0.67 -3.3
29,896 + 11919 mRNA_3551 0.72 -1.0
30,066 - 11919 mRNA_3551 0.79 -2.0
30,500 - -0.8
30,650 + -2.0
30,653 - -2.6
30,661 + -0.5
30,789 + -0.9
30,895 + 2.1
30,908 - -2.4
30,975 - -2.6
31,065 + 0.0
31,190 - 11920 mRNA_3552 0.14 -1.1
31,377 + 11920 mRNA_3552 0.20 0.1