Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3550

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3549: 11917 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 24932 to 26343 11917 mRNA_3550: 11918 - Hypothetical Protein, at 26790 to 27797 11918 mRNA_3551: 11919 - K10276 FBXL10_11, KDM2 F-box and leucine-rich repeat protein 10/11, at 28216 to 30545 11919

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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25,884 - 11917 mRNA_3549 0.67 0.2
25,976 - 11917 mRNA_3549 0.74 -2.1
26,114 - 11917 mRNA_3549 0.84 0.7
26,160 - 11917 mRNA_3549 0.87 -1.7
26,308 - -2.3
26,468 + 1.6
26,603 - -0.9
26,610 - -0.5
26,709 + -2.9
26,733 - -0.6
26,751 - -2.0
26,877 + -2.3
26,885 - 0.8
26,891 - 11918 mRNA_3550 0.10 -1.9
26,896 + 11918 mRNA_3550 0.11 -0.5
26,902 - 11918 mRNA_3550 0.11 -2.3
26,903 + 11918 mRNA_3550 0.11 -2.0
26,903 + 11918 mRNA_3550 0.11 -2.2
27,034 + 11918 mRNA_3550 0.24 -0.7
27,042 + 11918 mRNA_3550 0.25 -0.4
27,332 + 11918 mRNA_3550 0.54 -1.2
27,494 + 11918 mRNA_3550 0.70 0.1
27,737 + 0.1