Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3544

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3544: 11912 - K03506 POLE4 DNA polymerase epsilon subunit 4, at 15798 to 16734 11912 mRNA_3545: 11913 - HMMPfam-SAP domain-PF02037,ProSiteProfiles-SAP motif profile.-PS50800,SMART-Putative DNA-binding (bihelical) motif predicted to be involved in chromosomal organisation-SM00513,SUPERFAMILY--SSF68906, at 16929 to 18162 11913

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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14,819 - -0.4
14,829 - -1.8
15,476 - -0.8
15,635 - -1.2
15,645 + -0.8
15,651 + -0.6
15,774 - -1.6
15,796 + -1.8
15,799 + 0.6
15,932 + 11912 mRNA_3544 0.14 -0.3
15,935 - 11912 mRNA_3544 0.15 -2.3
16,231 + 11912 mRNA_3544 0.46 -2.0
16,474 + 11912 mRNA_3544 0.72 -1.5
16,861 + -1.2
16,911 - -1.4
17,096 + 11913 mRNA_3545 0.14 -0.7
17,239 - 11913 mRNA_3545 0.25 -5.1
17,276 - 11913 mRNA_3545 0.28 -2.6
17,394 - 11913 mRNA_3545 0.38 -0.6
17,669 + 11913 mRNA_3545 0.60 -0.6