Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3534

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3533: 11901 - K08337 ATG7 ubiquitin-like modifier-activating enzyme ATG7, at 327096 to 329991 11901 mRNA_3534: 11902 - Hypothetical Protein, at 330976 to 331488 11902 mRNA_3535: 11903 - HMMPfam-Protein of unknown function (DUF2419)-PF10343, at 331726 to 332711 11903

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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330,208 + 0.5
330,213 + -2.9
330,232 + -0.0
330,242 - 0.8
330,343 + -0.4
330,361 - -3.1
330,485 - -3.1
330,509 + -2.7
330,653 + -0.7
331,078 + 11902 mRNA_3534 0.20 -2.5
331,081 - 11902 mRNA_3534 0.20 -2.1
331,234 - 11902 mRNA_3534 0.50 0.4
331,236 + 11902 mRNA_3534 0.51 -2.0
331,379 + 11902 mRNA_3534 0.79 -1.5
331,487 - 0.2
331,509 - -0.6
331,514 + 0.1
331,520 - -0.5
331,538 + -0.7
331,651 - -0.1
332,134 - 11903 mRNA_3535 0.41 -0.8