Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3516

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3515: 11883 - K01277 DPP3 dipeptidyl-peptidase III, at 285817 to 288339 11883 mRNA_3516: 11884 - K01466 allB allantoinase, at 288576 to 290377 11884 mRNA_3517: 11885 - K06677 YCS4, CNAP1, CAPD2 condensin complex subunit 1, at 290580 to 295754 11885

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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287,930 - 11883 mRNA_3515 0.84 0.2
288,654 - -0.4
288,696 + -0.5
288,739 - -1.5
288,825 - 11884 mRNA_3516 0.14 -1.2
289,121 - 11884 mRNA_3516 0.30 1.5
289,324 - 11884 mRNA_3516 0.42 -0.8
290,066 + 11884 mRNA_3516 0.83 0.4
290,640 + 0.4