Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3459

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3458: 11826 - K03857 PIGA, GPI3 phosphatidylinositol glycan, class A, at 145752 to 147635 11826 mRNA_3459: 11827 - ProSiteProfiles-Src homology 3 (SH3) domain profile.-PS50002,SMART-Src homology 3 domains-SM00326,SUPERFAMILY--SSF50044, at 147794 to 151467 11827 mRNA_3460: 11828 - HMMPfam-Fasciclin domain-PF02469,SUPERFAMILY--SSF82153, at 151624 to 153827 11828

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
147,702 + -2.0
148,004 - -0.7
148,011 + -0.4
148,011 + -2.8
148,011 + -0.1
148,129 - -2.1
148,418 - 11827 mRNA_3459 0.17 -3.1
148,468 - 11827 mRNA_3459 0.18 -1.5
148,544 - 11827 mRNA_3459 0.20 -2.6
148,610 - 11827 mRNA_3459 0.22 0.2
148,627 - 11827 mRNA_3459 0.23 -0.9
148,648 - 11827 mRNA_3459 0.23 -0.7
148,742 + 11827 mRNA_3459 0.26 0.3
148,907 - 11827 mRNA_3459 0.30 -1.1
148,912 - 11827 mRNA_3459 0.30 -2.2
149,020 + 11827 mRNA_3459 0.33 -2.3
149,096 - 11827 mRNA_3459 0.35 -1.5
149,147 - 11827 mRNA_3459 0.37 -0.8
149,188 + 11827 mRNA_3459 0.38 -2.4
149,478 - 11827 mRNA_3459 0.46 -2.0
149,638 + 11827 mRNA_3459 0.50 0.6
149,650 + 11827 mRNA_3459 0.51 0.5
149,654 + 11827 mRNA_3459 0.51 -2.5
149,778 + 11827 mRNA_3459 0.54 0.4
149,881 - 11827 mRNA_3459 0.57 0.1
149,908 - 11827 mRNA_3459 0.58 -2.4
149,915 + 11827 mRNA_3459 0.58 -2.1
149,979 + 11827 mRNA_3459 0.59 -1.9
149,981 - 11827 mRNA_3459 0.60 -0.8
150,056 - 11827 mRNA_3459 0.62 -0.9
150,070 + 11827 mRNA_3459 0.62 -0.6
150,071 - 11827 mRNA_3459 0.62 -1.6
150,090 - 11827 mRNA_3459 0.62 -0.9
150,090 - 11827 mRNA_3459 0.62 0.2
150,215 - 11827 mRNA_3459 0.66 -0.4
150,217 + 11827 mRNA_3459 0.66 -0.7
150,221 - 11827 mRNA_3459 0.66 -0.9
150,294 + 11827 mRNA_3459 0.68 -4.0
150,370 - 11827 mRNA_3459 0.70 -1.2
150,476 - 11827 mRNA_3459 0.73 -1.8
150,535 - 11827 mRNA_3459 0.75 -0.0
150,641 - 11827 mRNA_3459 0.77 -0.6
150,671 - 11827 mRNA_3459 0.78 -0.9
150,794 - 11827 mRNA_3459 0.82 0.7
150,834 - 11827 mRNA_3459 0.83 -0.9
150,913 - 11827 mRNA_3459 0.85 -0.7
150,916 + 11827 mRNA_3459 0.85 0.8
150,943 + 11827 mRNA_3459 0.86 -2.7
151,047 + 11827 mRNA_3459 0.89 -0.9
151,093 - 11827 mRNA_3459 0.90 -1.3
151,172 + -0.2
151,281 - -0.2
151,391 - -1.0
151,395 - -0.4
151,397 - 0.4
151,403 - -1.3
151,411 - -0.8
151,434 + -1.9
151,520 + 0.7
151,525 + -1.8
151,529 + 0.3
151,559 + 0.2
151,564 + -1.9
151,568 + -1.5
151,570 + -0.5
151,574 + -0.7
151,710 + -1.2
151,714 - -1.4
151,866 + 11828 mRNA_3460 0.11 -0.5
152,018 - 11828 mRNA_3460 0.18 -2.0
152,362 - 11828 mRNA_3460 0.33 0.0