Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3435

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3434: 11802 - K00237 SDHD, SDH4 succinate dehydrogenase (ubiquinone) membrane anchor subunit, at 90402 to 91512 11802 mRNA_3435: 11803 - K12614 DDX6, RCK, DHH1 ATP-dependent RNA helicase DDX6/DHH1, at 91986 to 94017 11803 mRNA_3436: 11804 - HMMPfam-Oligosaccharyltransferase subunit Ribophorin II-PF05817, at 94407 to 97285 11804

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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91,520 + 0.1
91,524 + 0.4
91,528 - -2.0
91,645 + -2.7
91,769 - -0.4
91,803 + -1.3
91,825 - -1.8
93,718 - 11803 mRNA_3435 0.85 -0.5
93,863 + -0.7
94,022 + -3.6
94,207 - -2.1
94,477 - -0.4
94,553 + -1.9
94,683 + -0.3