Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3425

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3424: 11792 - Hypothetical Protein, at 64972 to 67736 11792 mRNA_3425: 11793 - K00789 metK S-adenosylmethionine synthetase, at 67905 to 69207 11793 mRNA_3426: 11794 - K08498 STX6 syntaxin 6, at 69287 to 70405 11794

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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67,038 - 11792 mRNA_3424 0.75 -3.2
67,090 - 11792 mRNA_3424 0.77 -3.5
67,372 - 11792 mRNA_3424 0.87 -0.5
67,477 - -1.1
67,491 - -0.4
67,504 + -1.2
67,663 + -3.6
67,927 - -3.0
68,074 + 11793 mRNA_3425 0.13 -2.4
68,118 + 11793 mRNA_3425 0.16 -1.8
68,236 - 11793 mRNA_3425 0.25 -3.1
68,610 + 11793 mRNA_3425 0.54 4.6
68,785 + 11793 mRNA_3425 0.68 -1.4
68,918 + 11793 mRNA_3425 0.78 -1.3
68,932 + 11793 mRNA_3425 0.79 -1.6
68,942 - 11793 mRNA_3425 0.80 0.2
68,969 - 11793 mRNA_3425 0.82 -3.3
69,111 + -2.0
69,117 + -1.0
69,130 - 1.2
69,134 + -1.0
69,153 + -2.9
69,254 + -1.1
69,257 + -0.6
69,423 - 11794 mRNA_3426 0.12 -0.9
69,569 - 11794 mRNA_3426 0.25 -1.1
69,581 - 11794 mRNA_3426 0.26 -0.2
69,728 + 11794 mRNA_3426 0.39 0.5
69,813 - 11794 mRNA_3426 0.47 -1.2
69,820 + 11794 mRNA_3426 0.48 -0.7
69,867 + 11794 mRNA_3426 0.52 -0.1
69,896 - 11794 mRNA_3426 0.54 -3.9
69,896 - 11794 mRNA_3426 0.54 -2.1
69,909 + 11794 mRNA_3426 0.56 -0.2