Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3424

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3423: 11791 - KOG3655 Drebrins and related actin binding proteins, at 63597 to 64502 11791 mRNA_3424: 11792 - Hypothetical Protein, at 64972 to 67736 11792 mRNA_3425: 11793 - K00789 metK S-adenosylmethionine synthetase, at 67905 to 69207 11793

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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64,023 - 11791 mRNA_3423 0.47 -1.2
64,032 - 11791 mRNA_3423 0.48 -0.0
64,082 + 11791 mRNA_3423 0.54 0.1
64,167 - 11791 mRNA_3423 0.63 -2.6
65,097 - -2.1
65,234 - -0.6
65,361 + 11792 mRNA_3424 0.14 -0.7
65,386 - 11792 mRNA_3424 0.15 -2.1
65,577 + 11792 mRNA_3424 0.22 -1.5
65,970 - 11792 mRNA_3424 0.36 -2.2
65,976 + 11792 mRNA_3424 0.36 0.0
66,554 + 11792 mRNA_3424 0.57 -1.8
66,612 - 11792 mRNA_3424 0.59 -1.1
66,651 - 11792 mRNA_3424 0.61 -2.3
66,727 + 11792 mRNA_3424 0.63 0.1
66,745 - 11792 mRNA_3424 0.64 0.1
67,038 - 11792 mRNA_3424 0.75 -3.2
67,090 - 11792 mRNA_3424 0.77 -3.5
67,372 - 11792 mRNA_3424 0.87 -0.5
67,477 - -1.1
67,491 - -0.4
67,504 + -1.2
67,663 + -3.6
67,927 - -3.0
68,074 + 11793 mRNA_3425 0.13 -2.4
68,118 + 11793 mRNA_3425 0.16 -1.8
68,236 - 11793 mRNA_3425 0.25 -3.1
68,610 + 11793 mRNA_3425 0.54 4.6