Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3388

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3387: 11755 - K01771 plc 1-phosphatidylinositol phosphodiesterase, at 557525 to 558870 11755 mRNA_3388: 11756 - KOG1577 Aldo/keto reductase family proteins, at 559521 to 561050 11756 mRNA_3389: 11757 - K00521 E1.16.1.7 ferric-chelate reductase, at 561833 to 564101 11757

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
558,662 + 11755 mRNA_3387 0.84 -2.5
558,782 + -0.0
558,789 + -1.8
558,906 - 0.6
558,913 - -1.0
558,970 + -2.4
559,068 - -1.8
559,096 + -1.9
559,112 + 0.9
559,158 - -3.3
559,275 - -0.1
560,157 - 11756 mRNA_3388 0.42 0.3
560,262 - 11756 mRNA_3388 0.48 0.0
560,662 + 11756 mRNA_3388 0.75 -2.3
561,111 - -3.1
561,114 + -2.4
561,120 + -0.8
561,123 - 0.1
561,130 + -1.2
561,182 + -1.3
561,263 + -0.7
561,267 + -2.2
561,287 + -0.4
561,308 + -2.9
561,315 - -4.1
561,331 + -1.1
561,393 + -1.6
561,400 - -2.3
561,403 + -2.3
561,404 - -2.1
561,411 + -2.8
561,414 - -1.7
561,416 - -2.6
561,418 - -3.0
561,425 - -1.0
561,439 + -0.4
561,448 - -1.1
561,450 + -1.1
561,455 + -1.1
561,460 - 0.6
561,503 - 1.3
561,557 + -1.4
561,587 - -1.9
561,592 - 2.3
561,599 + -5.3
561,603 + 0.9
561,666 - -0.1
561,666 - -0.9
561,680 - -1.4
561,689 + 0.6
561,692 - -0.7
561,705 + 0.7
561,708 - -2.7
561,709 + -2.4
561,709 + -2.2
561,719 + -1.9
561,722 - -2.1
561,726 + 0.5
561,729 - -0.5
561,730 - -2.2
561,731 - -1.2
561,749 - -0.6
561,751 + -3.7
561,754 + -0.2
561,756 + -1.8
561,759 - -1.7
561,895 - -1.5
561,896 + -2.1
561,906 + -2.3
562,013 - -2.7
562,033 - -2.5