Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3371

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3370: 11738 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 513932 to 515418 11738 mRNA_3371: 11739 - K13806 DAGL sn1-specific diacylglycerol lipase, at 516330 to 521387 11739 mRNA_3372: 11740 - K15103 UCP2_3, SLC25A8_9 solute carrier family 25 (mitochondrial uncoupling protein), member 8/9, at 522269 to 523428 11740

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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515,473 + -0.2
515,483 + -1.7
515,485 + -2.5
515,505 + -1.5
515,526 + 1.7
515,583 - -2.5
515,593 + -0.0
515,611 - -2.2
515,638 - -0.2
515,639 - 1.0
515,639 - -0.2
515,642 + 0.0
515,642 - -1.9
515,645 + -2.0
515,647 + -0.1
515,648 + -0.3
515,648 + -1.8
515,648 + -1.3
515,652 - -2.0
515,656 - -1.7
515,658 + -2.0
515,660 + -2.1
515,667 + -0.9
515,669 + -2.8
515,674 - -0.2
515,677 - -2.3
515,677 + -3.9
515,683 + -2.4
515,690 + -1.0
515,710 + 0.8
515,729 - -2.5
515,772 - -0.5
515,875 + -1.3
515,881 - 2.1
515,881 - -1.8
515,881 + -1.9
515,881 - -0.4
515,881 - -0.7
515,882 + -1.1
515,882 - -1.2
515,896 - -2.0
515,901 + 0.1
515,902 + -3.2
515,902 + -2.3
515,905 + 0.5
515,908 - -1.7
515,914 - 0.9
515,914 + -2.9
515,914 - -2.3
515,919 + -1.6
515,920 - -1.2
515,926 + -0.3
515,935 - -1.6
515,940 + -1.7
515,941 - -0.7
515,947 - -3.1
516,164 - -1.1
516,356 - 0.3
516,369 - -1.5
516,661 - -0.4
516,901 - 11739 mRNA_3371 0.11 -0.5
517,256 + 11739 mRNA_3371 0.18 -0.6
517,382 + 11739 mRNA_3371 0.21 0.9
517,388 + 11739 mRNA_3371 0.21 -0.5
517,606 - 11739 mRNA_3371 0.25 -1.3
517,821 + 11739 mRNA_3371 0.29 -0.4
517,833 + 11739 mRNA_3371 0.30 -2.1
517,950 - 11739 mRNA_3371 0.32 -1.0
517,962 + 11739 mRNA_3371 0.32 0.9
517,962 + 11739 mRNA_3371 0.32 0.0
517,966 + 11739 mRNA_3371 0.32 -1.3
518,245 - 11739 mRNA_3371 0.38 -3.1
518,271 + 11739 mRNA_3371 0.38 -0.6
518,320 - 11739 mRNA_3371 0.39 -1.0
518,965 + 11739 mRNA_3371 0.52 -2.8
519,007 + 11739 mRNA_3371 0.53 -0.4
519,188 + 11739 mRNA_3371 0.57 -1.6
519,286 - 11739 mRNA_3371 0.58 -1.7
519,372 + 11739 mRNA_3371 0.60 -0.9
519,375 - 11739 mRNA_3371 0.60 0.5
519,699 - 11739 mRNA_3371 0.67 -2.2
519,811 - 11739 mRNA_3371 0.69 1.7
519,817 - 11739 mRNA_3371 0.69 -1.3
519,969 - 11739 mRNA_3371 0.72 0.5
520,022 - 11739 mRNA_3371 0.73 -1.6
520,043 + 11739 mRNA_3371 0.73 -0.2
520,222 - 11739 mRNA_3371 0.77 -0.8
520,461 - 11739 mRNA_3371 0.82 -2.0
520,473 - 11739 mRNA_3371 0.82 -2.8
520,563 + 11739 mRNA_3371 0.84 -0.8
520,585 + 11739 mRNA_3371 0.84 -1.1
520,615 - 11739 mRNA_3371 0.85 -3.3
520,712 + 11739 mRNA_3371 0.87 0.0
520,806 + 11739 mRNA_3371 0.88 -1.4
520,823 - 11739 mRNA_3371 0.89 -1.7
520,849 + 11739 mRNA_3371 0.89 -2.1
520,872 - 11739 mRNA_3371 0.90 -0.6
520,945 - -0.6
520,957 + -1.6
520,959 + -3.6
520,977 + -2.4
520,978 + 1.2
521,002 + -1.3
521,081 - -2.9
521,085 + 0.3
521,108 + -1.4
521,147 + 1.3
521,154 + -0.8
521,156 + -2.5
521,209 + -3.1
521,227 + -1.8
521,259 - 0.3
521,291 - -1.1
521,298 + -2.4
521,422 - -0.7
521,540 - -2.0
521,560 + -1.3
521,562 + -0.8
521,569 - -0.5
521,574 + -3.9
521,579 - -3.9
521,583 + -2.0
521,588 - -2.8
521,603 + -0.5
521,607 - -2.7
521,610 + -1.6
521,610 + -2.2
521,631 - -1.6
521,631 + -4.6
521,633 - -1.5
521,736 + -2.2
521,742 + -1.0
521,758 - -0.4
521,905 - 1.0
522,188 + -2.7
522,235 - -1.2