Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3360

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3359: 11727 - Hypothetical Protein, at 492217 to 492797 11727 mRNA_3360: 11728 - KOG4836 Uncharacterized conserved protein, at 493196 to 494520 11728 mRNA_3361: 11729 - K11247 SH3GL endophilin-A, at 494941 to 495602 11729

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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492,229 - -0.5
492,243 - -1.7
492,307 + 11727 mRNA_3359 0.15 -2.2
492,323 + 11727 mRNA_3359 0.18 -1.2
492,339 + 11727 mRNA_3359 0.21 -2.9
492,805 + -0.1
493,077 + -1.2
493,444 - 11728 mRNA_3360 0.19 0.2
493,688 - 11728 mRNA_3360 0.37 -1.5
493,879 - 11728 mRNA_3360 0.52 -1.3
493,928 - 11728 mRNA_3360 0.55 -2.5
494,204 - 11728 mRNA_3360 0.76 -2.3
494,214 - 11728 mRNA_3360 0.77 -0.6
494,245 - 11728 mRNA_3360 0.79 -0.8
494,269 - 11728 mRNA_3360 0.81 -1.6
494,398 - -4.0
494,407 - 0.0
494,414 - -0.1
494,534 + -1.9
494,547 - -1.4
494,572 + -0.5
494,846 + -1.0
495,112 - 11729 mRNA_3361 0.26 0.7
495,158 + 11729 mRNA_3361 0.33 -0.3
495,239 - 11729 mRNA_3361 0.45 -2.7
495,284 + 11729 mRNA_3361 0.52 0.6