Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3355

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3354: 11722 - KOG2395 Protein involved in vacuole import and degradation, at 478400 to 482104 11722 mRNA_3355: 11723 - K01126 E3.1.4.46, glpQ, ugpQ glycerophosphoryl diester phosphodiesterase, at 482754 to 484525 11723 mRNA_3356: 11724 - K19306 BUD23 18S rRNA (guanine1575-N7)-methyltransferase, at 484974 to 486354 11724

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
482,222 - -0.9
482,367 + -0.5
482,380 + -1.3
482,395 - -1.0
482,395 + -0.7
482,405 + -0.9
482,409 - 0.5
482,409 - -0.8
482,422 + -1.2
482,552 + -1.2
482,560 + -2.0
482,565 + -3.3
482,571 - -2.6
482,571 - -0.6
482,585 - -1.1
482,719 - -1.1
482,735 + -1.0
482,866 - -2.3
482,870 - 0.3
482,874 + -2.1
482,900 - -0.9
483,022 - 11723 mRNA_3355 0.15 -1.2
483,025 - 11723 mRNA_3355 0.15 -2.0
483,027 - 11723 mRNA_3355 0.15 -0.7
483,042 + 11723 mRNA_3355 0.16 -1.1
483,042 - 11723 mRNA_3355 0.16 -1.0
483,065 - 11723 mRNA_3355 0.18 -1.1
483,375 + 11723 mRNA_3355 0.35 -2.7
483,375 - 11723 mRNA_3355 0.35 -0.4
483,692 - 11723 mRNA_3355 0.53 -1.0
483,890 + 11723 mRNA_3355 0.64 -3.0
484,056 - 11723 mRNA_3355 0.73 -0.3
484,207 + 11723 mRNA_3355 0.82 -1.5
484,240 + 11723 mRNA_3355 0.84 -2.7
484,513 + 0.3
484,646 - -1.6
484,780 + -1.2
484,808 + -2.4
485,092 - -1.6