Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3326

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3325: 11693 - Hypothetical Protein, at 398718 to 399832 11693 mRNA_3326: 11694 - BLAST allergen [Malassezia sympodialis ATCC 42132], at 400658 to 402328 11694 mRNA_3327: 11695 - HMMPfam-BAG domain-PF02179,SUPERFAMILY--SSF63491, at 402652 to 404277 11695

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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399,917 - 0.5
399,930 - -1.6
400,921 - 11694 mRNA_3326 0.16 0.1
400,952 + 11694 mRNA_3326 0.18 -1.6
401,071 + 11694 mRNA_3326 0.25 -2.3
401,348 + 11694 mRNA_3326 0.41 -0.9
401,394 + 11694 mRNA_3326 0.44 -1.2
401,423 + 11694 mRNA_3326 0.46 -1.9
401,649 - 11694 mRNA_3326 0.59 -3.6
401,665 + 11694 mRNA_3326 0.60 0.3
401,904 - 11694 mRNA_3326 0.75 0.3
402,369 - -1.2
402,470 + -1.8
402,509 + -2.4
402,569 + -1.6
402,588 + -1.7
402,708 - -1.1
403,050 - 11695 mRNA_3327 0.24 -1.0
403,078 - 11695 mRNA_3327 0.26 -3.4
403,085 + 11695 mRNA_3327 0.27 -2.0
403,190 + 11695 mRNA_3327 0.33 -0.4