Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3324

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3323: 11691 - HMMPfam-RTA1 like protein-PF04479, at 395494 to 396830 11691 mRNA_3324: 11692 - HMMPfam-RTA1 like protein-PF04479, at 397238 to 398541 11692 mRNA_3325: 11693 - Hypothetical Protein, at 398718 to 399832 11693

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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396,275 - 11691 mRNA_3323 0.58 -0.9
396,446 + 11691 mRNA_3323 0.71 -2.9
396,581 + 11691 mRNA_3323 0.81 0.0
396,998 + -1.6
397,010 - -0.2
397,011 - -1.0
397,052 + -0.6
397,151 - -2.5
397,170 - -0.6
397,173 + -1.4
397,182 - 0.6
397,196 + -1.4
397,296 - -0.9
397,723 - 11692 mRNA_3324 0.37 -0.2
398,171 - 11692 mRNA_3324 0.72 -4.0
398,741 - -3.4
398,864 - 11693 mRNA_3325 0.13 -1.9
398,894 + 11693 mRNA_3325 0.16 -0.5