Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3299

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3298: 11666 - Hypothetical Protein, at 329367 to 333104 11666 mRNA_3299: 11667 - K19704 PTC1 protein phosphatase PTC1, at 333758 to 335633 11667 mRNA_3300: 11668 - HMMPfam-Amidohydrolase-PF13147,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 335794 to 339454 11668

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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332,945 + -0.3
333,119 + -2.2
333,290 + -1.6
333,294 + -0.4
333,298 + -3.4
333,309 - -3.3
333,392 - -0.3
333,399 + -0.6
333,591 + -0.9
333,875 + -1.3
333,998 + 11667 mRNA_3299 0.13 -2.8
334,161 - 11667 mRNA_3299 0.21 -3.0
334,161 + 11667 mRNA_3299 0.21 -0.2
334,300 + 11667 mRNA_3299 0.29 -3.6
334,844 - 11667 mRNA_3299 0.58 -2.6
334,844 + 11667 mRNA_3299 0.58 -0.3
334,894 + 11667 mRNA_3299 0.61 -1.2
335,164 - 11667 mRNA_3299 0.75 -2.9
335,184 - 11667 mRNA_3299 0.76 -1.7
335,440 + 11667 mRNA_3299 0.90 -4.6
335,458 - -2.0
335,463 - -3.2
335,607 + -3.0
335,660 - -0.9
335,759 + -1.1
335,775 + -1.1
335,923 - -3.1
335,929 - -0.5
336,044 + -2.0
336,359 + 11668 mRNA_3300 0.15 -1.1
336,359 - 11668 mRNA_3300 0.15 -2.0