Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3284

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3283: 11651 - K20224 IPO9, RANBP9 importin-9, at 287035 to 291052 11651 mRNA_3284: 11652 - BLAST something about silencing, SAS, complex subunit 4 [Rh..., at 291181 to 293324 11652 mRNA_3285: 11653 - KOG2069 Golgi transport complex subunit, at 293945 to 296560 11653

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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291,082 - -0.8
291,168 + 0.2
291,456 + 11652 mRNA_3284 0.13 0.7
291,504 + 11652 mRNA_3284 0.15 0.2
291,893 + 11652 mRNA_3284 0.33 1.2
292,061 + 11652 mRNA_3284 0.41 -1.8
292,066 + 11652 mRNA_3284 0.41 -2.7
292,345 + 11652 mRNA_3284 0.54 0.1
292,477 + 11652 mRNA_3284 0.60 0.3
293,408 + -1.3
293,444 + -0.3
293,557 - -2.0
293,590 - -3.3
293,594 + 1.0
293,706 - -4.2
293,822 - -1.2
293,834 - -0.6
294,135 - 0.5