Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3259

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3258: 11626 - K00791 miaA, TRIT1 tRNA dimethylallyltransferase, at 232790 to 234851 11626 mRNA_3259: 11627 - Hypothetical Protein, at 234995 to 236136 11627 mRNA_3260: 11628 - HMMPfam-Eukaryotic mitochondrial regulator protein-PF12298, at 236332 to 237668 11628

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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234,361 + 11626 mRNA_3258 0.76 -1.8
234,606 - 11626 mRNA_3258 0.88 0.7
234,931 - -2.4
234,936 - 1.6
234,936 - -1.8
234,938 - -0.9
234,943 + -4.5
234,948 + -3.3
234,967 + -2.9
235,098 - -1.2
235,218 - 11627 mRNA_3259 0.20 -2.5
235,362 - 11627 mRNA_3259 0.32 -0.4
235,407 + 11627 mRNA_3259 0.36 -2.2
235,839 + 11627 mRNA_3259 0.74 -2.7
235,935 + 11627 mRNA_3259 0.82 0.4
236,152 + -1.8
236,271 - -1.3