Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3244

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3243: 11611 - K10752 RBBP4, HAT2, CAF1, MIS16 histone-binding protein RBBP4, at 196612 to 198456 11611 mRNA_3244: 11612 - Hypothetical Protein, at 199306 to 200606 11612 mRNA_3245: 11613 - HMMPfam-Fungal protein of unknown function (DUF1752)-PF08550,HMMPfam-Protein of unknown function (DUF3295)-PF11702, at 201066 to 204037 11613

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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198,330 - -1.9
198,422 + 0.5
198,901 - -2.8
199,024 + -0.6
199,061 + -0.0
199,075 + -2.5
199,079 - -0.2
199,237 - -0.6
199,405 - 0.5
199,521 + 11612 mRNA_3244 0.17 -2.2
200,108 + 11612 mRNA_3244 0.62 -2.4
200,206 + 11612 mRNA_3244 0.69 -0.0
200,479 + -2.9
200,500 - -0.9
200,515 - -2.8
200,553 - -3.5
200,597 + -3.1
201,006 - -2.0
201,130 - -0.3