Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3238

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3237: 11605 - K10357 MYO5 myosin V, at 176488 to 184590 11605 mRNA_3238: 11606 - BLAST RNA replication protein [Rhizoctonia solani], at 184726 to 188428 11606 mRNA_3239: 11607 - K15425 PPP4R2 serine/threonine-protein phosphatase 4 regulatory subunit 2, at 188570 to 189872 11607

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
183,873 - -3.2
184,060 + -0.0
184,071 - 0.9
184,499 - -0.8
184,501 + 1.4
184,503 + -0.4
184,538 + 0.1
184,766 - -0.6
184,777 + -4.9
184,797 + -1.6
184,834 - -0.4
184,931 + -3.2
184,949 + -1.3
185,051 + -0.3
185,414 - 11606 mRNA_3238 0.19 0.0
185,529 + 11606 mRNA_3238 0.22 -2.3
185,540 + 11606 mRNA_3238 0.22 -0.9
185,547 + 11606 mRNA_3238 0.22 0.4
185,885 - 11606 mRNA_3238 0.31 -1.5
185,933 - 11606 mRNA_3238 0.33 -0.6
185,949 + 11606 mRNA_3238 0.33 -2.1
185,966 - 11606 mRNA_3238 0.33 -1.7
186,020 + 11606 mRNA_3238 0.35 -2.3
186,258 - 11606 mRNA_3238 0.41 -0.9
186,390 + 11606 mRNA_3238 0.45 -0.9
186,506 - 11606 mRNA_3238 0.48 0.2
186,537 + 11606 mRNA_3238 0.49 -0.6
186,587 - 11606 mRNA_3238 0.50 -2.1
186,650 - 11606 mRNA_3238 0.52 -3.8
186,730 - 11606 mRNA_3238 0.54 -0.6
186,948 - 11606 mRNA_3238 0.60 -1.0
187,002 + 11606 mRNA_3238 0.61 -1.0
187,014 + 11606 mRNA_3238 0.62 -0.1
187,110 - 11606 mRNA_3238 0.64 -1.0
187,266 - 11606 mRNA_3238 0.69 -2.1
187,304 + 11606 mRNA_3238 0.70 -0.4
187,308 + 11606 mRNA_3238 0.70 -0.8
187,310 + 11606 mRNA_3238 0.70 -0.8
187,439 - 11606 mRNA_3238 0.73 0.7
187,714 + 11606 mRNA_3238 0.81 -2.3
187,717 - 11606 mRNA_3238 0.81 -3.4
187,720 + 11606 mRNA_3238 0.81 -1.2
188,288 + -0.9
188,346 + -3.4
188,674 + -2.7
188,680 - 3.0
188,738 - 11607 mRNA_3239 0.13 0.4
188,782 + 11607 mRNA_3239 0.16 -3.0
188,789 + 11607 mRNA_3239 0.17 -2.2
188,792 - 11607 mRNA_3239 0.17 -0.8
188,985 + 11607 mRNA_3239 0.32 -3.0
189,049 - 11607 mRNA_3239 0.37 -1.0
189,207 - 11607 mRNA_3239 0.49 -0.9
189,221 - 11607 mRNA_3239 0.50 -2.2
189,348 + 11607 mRNA_3239 0.60 -2.7
189,385 - 11607 mRNA_3239 0.63 -0.3