Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3235

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3235: 11603 - Hypothetical Protein, at 170278 to 173457 11603 mRNA_3236: 11604 - K01755 argH, ASL argininosuccinate lyase, at 173698 to 175795 11604

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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169,622 + -2.0
169,635 + -2.4
169,873 - -3.1
170,012 + -1.7
170,072 + 0.0
170,135 - -1.2
170,183 + -2.1
170,187 + -0.6
170,188 - -2.7
170,190 - -0.4
170,193 + 0.3
170,197 + 0.4
170,200 - -0.3
170,216 - -0.3
170,220 + -1.3
170,356 + -1.1
170,476 + 1.0
170,616 + 11603 mRNA_3235 0.11 0.0
170,744 + 11603 mRNA_3235 0.15 -2.8
170,770 - 11603 mRNA_3235 0.15 -0.8
170,800 + 11603 mRNA_3235 0.16 -0.6
170,894 + 11603 mRNA_3235 0.19 -0.5
170,954 - 11603 mRNA_3235 0.21 -1.4
171,132 + 11603 mRNA_3235 0.27 1.9
171,206 + 11603 mRNA_3235 0.29 -0.4
171,473 - 11603 mRNA_3235 0.38 -1.6
171,491 + 11603 mRNA_3235 0.38 0.2
171,495 - 11603 mRNA_3235 0.38 -0.7
171,538 + 11603 mRNA_3235 0.40 -1.5
171,574 - 11603 mRNA_3235 0.41 -3.4
171,842 - 11603 mRNA_3235 0.49 -2.5
172,017 + 11603 mRNA_3235 0.55 -1.3
172,218 + 11603 mRNA_3235 0.61 -0.0
172,268 - 11603 mRNA_3235 0.63 -0.5
172,556 + 11603 mRNA_3235 0.72 -0.1
172,556 + 11603 mRNA_3235 0.72 -1.8
172,724 + 11603 mRNA_3235 0.77 -1.2
172,993 - 11603 mRNA_3235 0.85 -2.1
173,184 + -0.9
173,847 + -1.1
173,892 - -1.7
174,169 - 11604 mRNA_3236 0.22 -3.1