Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3216

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3215: 11583 - K17103 CHO1, pssA CDP-diacylglycerol---serine O-phosphatidyltransferase, at 110757 to 112157 11583 mRNA_3216: 11584 - K12881 THOC4, ALY THO complex subunit 4, at 112618 to 114116 11584

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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112,251 - -1.0
112,374 + -2.2
112,390 + 0.0
112,539 - -1.1
112,543 - -1.8
112,812 - 11584 mRNA_3216 0.13 -3.5
112,834 - 11584 mRNA_3216 0.14 0.1
112,850 - 11584 mRNA_3216 0.15 -0.6
113,424 + 11584 mRNA_3216 0.54 -1.9
113,556 + 11584 mRNA_3216 0.63 -2.1
114,323 - 0.8
114,448 + -1.3
114,561 + -2.0
114,574 + -1.6
114,759 - -0.9
114,759 - -0.6
114,929 - -0.3
114,932 + 1.1
114,938 + -1.5
114,987 + -2.7
115,069 - -1.8
115,071 - -3.7
115,072 + -2.2
115,086 + -1.1
115,088 + 0.5
115,096 + -1.2
115,101 - -1.1
115,102 + -3.5
115,103 - -1.3