Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3210

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3209: 11577 - Hypothetical Protein, at 95744 to 98235 11577 mRNA_3210: 11578 - K03512 POLL DNA polymerase lambda, at 98514 to 102281 11578 mRNA_3211: 11579 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 102441 to 104131 11579

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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97,537 - 11577 mRNA_3209 0.72 -2.4
97,601 + 11577 mRNA_3209 0.75 -0.3
97,603 - 11577 mRNA_3209 0.75 1.3
97,617 - 11577 mRNA_3209 0.75 -1.6
97,638 - 11577 mRNA_3209 0.76 -0.6
97,774 + 11577 mRNA_3209 0.81 -0.7
97,931 - 11577 mRNA_3209 0.88 -0.2
98,043 - -0.9
98,218 + -2.5
98,298 + -0.4
98,353 + -2.9
98,462 + -2.3
98,532 + -2.7
98,833 - -0.5
98,863 - -0.7
99,078 + 11578 mRNA_3210 0.15 0.1
99,112 + 11578 mRNA_3210 0.16 0.6
99,245 + 11578 mRNA_3210 0.19 -2.0
99,261 - 11578 mRNA_3210 0.20 -0.9
99,337 - 11578 mRNA_3210 0.22 0.6
99,395 + 11578 mRNA_3210 0.23 -0.5
99,847 + 11578 mRNA_3210 0.35 -1.0
99,948 - 11578 mRNA_3210 0.38 -3.5
99,949 + 11578 mRNA_3210 0.38 1.2
99,981 - 11578 mRNA_3210 0.39 -0.8
99,996 - 11578 mRNA_3210 0.39 -1.2
100,021 - 11578 mRNA_3210 0.40 -2.2
100,257 + 11578 mRNA_3210 0.46 -1.8
100,329 + 11578 mRNA_3210 0.48 -0.2
100,517 - 11578 mRNA_3210 0.53 -0.6
100,753 - 11578 mRNA_3210 0.59 -1.6
101,104 + 11578 mRNA_3210 0.69 -0.5
101,160 + 11578 mRNA_3210 0.70 -3.0
101,161 - 11578 mRNA_3210 0.70 -2.5
101,177 - 11578 mRNA_3210 0.71 -3.9
101,245 + 11578 mRNA_3210 0.72 -2.0
101,348 + 11578 mRNA_3210 0.75 -1.9
101,375 - 11578 mRNA_3210 0.76 -0.0
101,855 - 11578 mRNA_3210 0.89 1.7
101,872 - 11578 mRNA_3210 0.89 -2.9
101,898 + 11578 mRNA_3210 0.90 -1.8
101,944 + -1.0
101,955 + -2.8
102,116 + -1.2
102,222 - -1.7
102,225 + -2.9
102,373 - -1.7
102,389 + -0.7
102,488 + -2.1
102,538 + -0.5
102,706 + 11579 mRNA_3211 0.16 -1.7
102,709 - 11579 mRNA_3211 0.16 0.3
102,825 + 11579 mRNA_3211 0.23 -0.5
102,957 + 11579 mRNA_3211 0.31 -1.6
103,001 + 11579 mRNA_3211 0.33 -4.3
103,134 - 11579 mRNA_3211 0.41 -1.2
103,218 - 11579 mRNA_3211 0.46 -0.1
103,239 - 11579 mRNA_3211 0.47 0.0
103,251 - 11579 mRNA_3211 0.48 -0.0