Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3208

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3207: 11575 - Hypothetical Protein, at 91562 to 92218 11575 mRNA_3208: 11576 - HMMPfam-Meiotically up-regulated gene 113-PF13455, at 92724 to 94778 11576 mRNA_3209: 11577 - Hypothetical Protein, at 95744 to 98235 11577

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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91,772 - 11575 mRNA_3207 0.32 0.6
91,782 - 11575 mRNA_3207 0.33 -4.2
91,793 - 11575 mRNA_3207 0.35 -2.1
91,943 + 11575 mRNA_3207 0.58 -2.8
92,069 - 11575 mRNA_3207 0.77 0.1
92,227 - -2.2
92,235 + -2.1
92,656 - -0.8
93,094 + 11576 mRNA_3208 0.18 -1.8
93,260 + 11576 mRNA_3208 0.26 -1.0
93,400 + 11576 mRNA_3208 0.33 -1.7
93,594 - 11576 mRNA_3208 0.42 -2.6
93,597 + 11576 mRNA_3208 0.42 -1.0
93,600 - 11576 mRNA_3208 0.43 -1.0
93,787 - 11576 mRNA_3208 0.52 -1.8
93,814 + 11576 mRNA_3208 0.53 -1.3
94,134 - 11576 mRNA_3208 0.69 -3.5
94,249 - 11576 mRNA_3208 0.74 -0.0
94,258 + 11576 mRNA_3208 0.75 -1.5
94,561 - 11576 mRNA_3208 0.89 0.0
94,840 - -2.1
94,881 + -4.5
95,002 - 1.5
95,021 + -2.9
95,180 + -0.3
95,183 + -0.7
95,271 + -2.2
95,345 + -2.4
95,350 - -1.0
95,609 - -0.4
95,610 + -0.7
95,617 + -0.1