Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3204

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3202: 11570 - KOG2533 Permease of the major facilitator superfamily, at 79575 to 81413 11570 mRNA_3203: 11571 - Hypothetical Protein, at 81556 to 81888 11571 mRNA_3204: 11572 - SUPERFAMILY--SSF69118, at 82145 to 83066 11572 mRNA_3205: 11573 - K13281 uvsE, UVE1 UV DNA damage endonuclease, at 83287 to 85713 11573

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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81,318 - -1.0
81,318 + -2.0
81,448 + -1.2
81,499 + -0.7
81,716 - 11571 mRNA_3203 0.48 1.5
81,818 + 11571 mRNA_3203 0.79 0.4
81,890 - -1.0
81,892 - -1.1
81,917 - -0.7
82,093 + -1.8
82,101 - -0.3
82,182 + -1.4
82,248 - 11572 mRNA_3204 0.11 -1.6
82,653 - 11572 mRNA_3204 0.55 -0.3
82,940 + 11572 mRNA_3204 0.86 -4.0
83,124 + -3.1
83,137 + 1.1
83,172 - -2.1
83,263 - -3.9
83,281 - -2.3
83,432 - -0.3
83,585 + 11573 mRNA_3205 0.12 -2.0
83,611 + 11573 mRNA_3205 0.13 -1.0
83,709 + 11573 mRNA_3205 0.17 -0.0
83,822 - 11573 mRNA_3205 0.22 0.2
83,827 - 11573 mRNA_3205 0.22 -0.5
83,832 + 11573 mRNA_3205 0.22 -0.0
83,989 + 11573 mRNA_3205 0.29 -1.3
84,009 - 11573 mRNA_3205 0.30 0.3
84,016 + 11573 mRNA_3205 0.30 1.5