Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3202

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3201: 11569 - K12175 GPS1, COPS1, CSN1 COP9 signalosome complex subunit 1, at 77177 to 79098 11569 mRNA_3202: 11570 - KOG2533 Permease of the major facilitator superfamily, at 79575 to 81413 11570 mRNA_3203: 11571 - Hypothetical Protein, at 81556 to 81888 11571 mRNA_3204: 11572 - SUPERFAMILY--SSF69118, at 82145 to 83066 11572

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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78,842 + 11569 mRNA_3201 0.87 -3.3
78,994 + -2.0
78,999 - -0.4
79,279 - -1.3
79,285 - -2.1
79,346 - -1.1
79,467 + -2.5
79,968 + 11570 mRNA_3202 0.21 -1.7
80,530 + 11570 mRNA_3202 0.52 -1.3
80,632 - 11570 mRNA_3202 0.57 0.1
80,960 - 11570 mRNA_3202 0.75 1.3
81,318 - -1.0
81,318 + -2.0
81,448 + -1.2
81,499 + -0.7
81,716 - 11571 mRNA_3203 0.48 1.5
81,818 + 11571 mRNA_3203 0.79 0.4
81,890 - -1.0
81,892 - -1.1
81,917 - -0.7
82,093 + -1.8
82,101 - -0.3
82,182 + -1.4
82,248 - 11572 mRNA_3204 0.11 -1.6