Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3147

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3146: 11514 - K11273 DDX11, CHL1, CTF1 chromosome transmission fidelity protein 1, at 423793 to 427312 11514 mRNA_3147: 11515 - Hypothetical Protein, at 427660 to 428214 11515 mRNA_3148: 11516 - BLAST putative fungal-specific transcription factor [Tricho..., at 429143 to 430117 11516

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
426,921 - 11514 mRNA_3146 0.89 -2.4
426,952 + 11514 mRNA_3146 0.90 -1.0
427,071 + -1.4
427,081 - -0.7
427,083 + -1.1
427,205 - 0.5
427,205 - -1.4
427,210 - -2.2
427,214 + -2.7
427,226 + -0.1
427,228 - 0.6
427,237 + -1.3
427,238 + -1.5
427,390 - -0.7
427,392 - -0.6
427,399 + -2.2
427,404 + -1.6
427,406 - -2.6
427,412 - 0.2
427,413 + -2.6
427,422 - -1.9
427,424 + -2.3
427,520 - -0.8
427,525 - -1.2
427,537 + -0.2
427,669 + -3.1
427,682 + -2.4
427,713 - -0.7
427,793 + 11515 mRNA_3147 0.24 0.7
427,812 - 11515 mRNA_3147 0.27 -1.2
428,009 - 11515 mRNA_3147 0.63 -0.4
428,074 - 11515 mRNA_3147 0.75 -2.4
428,288 + -2.7
428,409 + 0.4
428,688 + -2.6
428,699 + -1.7
428,702 + -2.3
428,707 + -0.1
428,798 - -1.5
428,799 + -0.5
428,829 - -3.5
428,855 + -1.2
428,867 - -2.6
429,000 - -1.7
429,009 + -1.6