Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3094

Experiments: 40 hrs No Buoyancy Separation

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3093: 11461 - Hypothetical Protein, at 304363 to 305282 11461 mRNA_3094: 11462 - HMMPfam-Bestrophin, RFP-TM, chloride channel-PF01062, at 305611 to 307227 11462 mRNA_3095: 11463 - K01739 metB cystathionine gamma-synthase, at 307460 to 310020 11463

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
remove
304,687 - 11461 mRNA_3093 0.35 -2.3
304,695 + 11461 mRNA_3093 0.36 -1.7
304,753 + 11461 mRNA_3093 0.42 -1.1
304,926 - 11461 mRNA_3093 0.61 -1.5
304,959 + 11461 mRNA_3093 0.65 0.5
304,999 + 11461 mRNA_3093 0.69 -1.0
305,056 - 11461 mRNA_3093 0.75 -0.9
305,060 - 11461 mRNA_3093 0.76 0.8
305,077 - 11461 mRNA_3093 0.78 -0.4
305,208 + -4.1
305,211 - 1.2
305,219 + -2.5
305,223 + -0.6
305,339 - -1.0
305,364 + 0.2
305,365 + 1.1
305,367 + 0.5
305,369 + -0.4
305,376 - -1.3
305,377 + -1.4
305,378 - -0.8
305,381 - -1.6
305,381 - -0.1
305,470 + -0.5
305,481 - -1.0
305,483 + -0.4
305,492 + -1.8
305,492 + -0.8
305,508 + -1.6
305,508 - -1.7
305,512 - -1.5
305,513 - -1.1
305,516 - -4.2
305,516 + -1.5
305,520 - -2.2
305,522 + -1.0
305,524 - -0.9
305,535 - -1.0
305,542 + -0.5
305,562 - 0.1
305,628 + -1.0
305,636 - 0.3
305,660 - 0.5
305,664 - -1.3
305,680 + -1.4
305,683 - -1.5
305,687 + -1.5
305,694 - 0.8
305,725 - -1.0
305,797 - 11462 mRNA_3094 0.12 -2.2
305,803 - 11462 mRNA_3094 0.12 -1.1
305,816 + 11462 mRNA_3094 0.13 -3.4
305,834 - 11462 mRNA_3094 0.14 0.3
305,847 + 11462 mRNA_3094 0.15 -1.3
305,848 + 11462 mRNA_3094 0.15 -1.5
305,876 - 11462 mRNA_3094 0.16 -2.4
305,931 - 11462 mRNA_3094 0.20 -0.6
305,979 + 11462 mRNA_3094 0.23 -2.5
305,989 + 11462 mRNA_3094 0.23 -1.3
306,002 - 11462 mRNA_3094 0.24 -2.9
306,112 + 11462 mRNA_3094 0.31 -1.1
306,128 + 11462 mRNA_3094 0.32 -1.5
306,252 - 11462 mRNA_3094 0.40 -0.4
306,353 + 11462 mRNA_3094 0.46 -0.4
306,724 + 11462 mRNA_3094 0.69 0.8
306,852 - 11462 mRNA_3094 0.77 -0.3
306,857 - 11462 mRNA_3094 0.77 -0.4
306,973 - 11462 mRNA_3094 0.84 -4.2
307,007 - 11462 mRNA_3094 0.86 0.4
307,139 - -0.0
307,145 + -1.2
307,151 + -2.1
307,152 - 0.3
307,259 - -2.0
307,268 - -3.1
307,269 + -1.4
307,271 + 0.1
307,273 - -0.4
307,273 - -1.4
307,274 + -1.6
307,278 + 0.4
307,281 + -0.7
307,284 - 0.2
307,288 + -1.9
307,290 + -2.3
307,294 + -3.3
307,294 + -0.5
307,294 - -2.7
307,297 + -1.4
307,297 - -1.4
307,300 + -2.6
307,302 + -1.3
307,303 - -4.0
307,304 + 0.4
307,305 + -0.0
307,305 + 0.3
307,308 - -2.0
307,312 - -0.8
307,326 + 0.8
307,332 + -0.4
307,333 + -1.8
307,336 - -0.4
307,344 + -0.8
307,353 + 1.0
307,408 + -1.2
307,449 + 0.7
307,475 - -0.3
307,621 - -1.2
307,728 - 11463 mRNA_3095 0.10 -0.5
307,765 - 11463 mRNA_3095 0.12 -2.5
307,774 + 11463 mRNA_3095 0.12 -0.3
307,776 + 11463 mRNA_3095 0.12 -2.8
307,780 - 11463 mRNA_3095 0.12 0.4
307,781 + 11463 mRNA_3095 0.13 -1.1
307,902 - 11463 mRNA_3095 0.17 -1.7
308,226 - 11463 mRNA_3095 0.30 -0.6