Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3054

Experiments: 40 hrs No Buoyancy Separation

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3053: 11421 - K06889 K06889 uncharacterized protein, at 205361 to 206848 11421 mRNA_3054: 11422 - Hypothetical Protein, at 207270 to 207722 11422 mRNA_3055: 11423 - Hypothetical Protein, at 208583 to 210185 11423

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs No Buoyancy Separation
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206,322 - 11421 mRNA_3053 0.65 -0.9
206,341 + 11421 mRNA_3053 0.66 -0.8
206,477 - 11421 mRNA_3053 0.75 -2.1
206,496 + 11421 mRNA_3053 0.76 -1.0
206,612 + 11421 mRNA_3053 0.84 -1.1
206,617 - 11421 mRNA_3053 0.84 -0.1
206,718 + 0.1
206,769 - -1.1
206,907 - -1.2
206,912 - -2.4
206,922 + 0.6
206,931 - -2.3
206,938 - -1.5
206,957 + -1.1
206,961 - -2.2
206,971 - -1.9
207,041 - -0.7
207,148 + -0.5
207,238 - -1.0
207,382 + 11422 mRNA_3054 0.25 -1.2
207,382 - 11422 mRNA_3054 0.25 -2.0
207,643 - 11422 mRNA_3054 0.82 0.0
207,643 - 11422 mRNA_3054 0.82 -1.8
207,818 + -3.4
207,925 + -2.5
207,955 - 1.3
208,071 - -2.1
208,092 - -1.5
208,096 + -0.2
208,099 - -1.6
208,100 - -0.2
208,101 + -3.6
208,103 + 0.1
208,108 - 0.0
208,108 + -1.4
208,108 + -3.6
208,112 - -0.1
208,118 + -3.1
208,123 - -0.6
208,124 + -0.4
208,155 - -0.8
208,223 + -3.8
208,228 - -3.1
208,229 + -1.3
208,239 - 0.2
208,248 + -1.6
208,253 + -1.2
208,259 - -0.7
208,392 - -0.0
208,397 - -0.8
208,400 - 0.5
208,414 + -3.9
208,420 + -1.5
208,523 + -1.1
208,561 - -0.8
208,653 + -0.0
208,681 + -2.2
208,689 + 0.6